Литература

Abraham J., Feldman J., Nasmyth K.A., Strathem J.N., Klar A.J., Broach J.R., and Hicks J.B. 1983. Sites required for position-effect regulation of mating-type information in yeast. Cold Spring Harbor Symp. Quant. Biol. 47: 989–998.

Allfrey V.G., Inoue A., Karn J., Johnson E.M., and Vidali G. 1974. Phosphorylation of DNA-binding nuclear acidic proteins and gene activation in the HeLa cell cycle. Cold Spring Harbor Symp. Quant. Biol. 38: 785–801.

Andrulis E.D., Neiman A.M., Zappulla D.C., and Ster-nglanz R. 1998. Perinuclear localization of chromatin facilitates transcriptional silencing. Nature 394: 592–595.

Andrulis E.D., Zappulla D.C., Ansari A., Perrod S., Laiosa C.V., Gartenberg M.R., and Stemglanz R. 2002. Esc1, a nuclear periphery protein required for Sir4-based plasmid anchoring and partitioning. Mol. Cell. Biol. 22: 8292–8301.

Aparicio O.M. and Gottschling D.E. 1994. Overcoming telomeric silencing: A trans-activator competes to establish gene expression in a cell cycle-dependent way. Genes Dev. 8: 1133–1146.

Ariel M., Selig S., Brandeis M., Kitsberg D., Kafri T., Weiss A., Keshet I., Razin A., and Cedar H. 1993. Allele-specific structures in the mouse Igf2-H19 domain. Cold Spring Harbor Symp. Quant. Biol. 58: 307–313.

Bell A., Boyes J., Chung J., Pikaart M., Prioleau M.N., Recillas F., Saitoh N., and Felsenfeld G. 1998. The establishment of active chromatin domains. Cold Spring Harbor Symp. Quant. Biol 63: 509–514.

Bell S.P., Marahrens Y., Rao H., and Stillman B. 1993. The replicon model and eukaryotic chromosomes. Cold Spring Harbor Symp. Quant. Biol. 58: 435–442.

Belote J.M., McKeown M.B., Andrew D.J., Scott T.N., Wolfner M.F., and Baker B.S. 1985. Control of sexual differentiation in Drosophila melanogaster. Cold Spring Harbor Symp. Quant Biol. 50: 605–614.

Beutler E. 1964. Gene inactivation: The distribution of gene products among populations of cells in heterozygous humans. Cold Spring Harbor Symp. Quant. Biol. 29: 261–271.

Bird A.P. 1993. Functions for DNA methylation in vertebrates. Cold Spring Harbor Symp. Quant. Biol. 58: 281–285.

Borst P., Gommers-Ampt J.H., Ligtenberg M.J., RudenkoG., Kieft R., Taylor M.C., Blundell P.A., and van Leeuwen F. 1993. Control of antigenic variation in African trypanosomes. Cold Spring Harbor Symp. Quant. Biol. 58: 105–114.

Brink R.A. 1958. Paramutation at the R locus in maize. Cold Spring Harbor Symp. Quant. Biol. 23: 379–391.

Campbell A. 1981. Some general questions about movable elements and their implications. Cold Spring Harbor Symp. Quant. Biol. 45: 1–9.

Cattanach B.M. and Kirk M. 1985. Differential activity of maternally and paternally derived chromosome regions in mice. Nature 315: 496–498.

Cedar H., Stein R., Gruenbaum Y., Naveh-Many T., Sciaky-Gallili N., and Razin A. 1983. Effect of DNA methylation on gene expression. Cold Spring Harbor Symp. Quant. Biol. 47: 605–609.

Chambon P. 1978. Summary: The molecular biology of the eukaryotic genome is coming of age. Cold Spring Harbor Symp. Quant. Biol. 42: 1209–1234.

Cheng T.H. and Gartenberg M.R. 2000. Yeast heterochromatin is a dynamic structure that requires silencers continuously. Genes Dev. 14: 452–463.

CheutinT, McNaim A.J., Jenuwein T, Gilbert D.M., Singh P.B., and Misteli T. 2003. Maintenance of stable heterochromatin domains by dynamic HP1 binding. Science 299: 721–725.

Clark D., Reitman M., Studitsky V., Chung J., Westphal H., Lee E., and Felsenfeld G. 1993. Chromatin structure of transcriptionally active genes. Cold Spring Harbor Symp. Quant. Biol. 58: 1–6.

Cockell M., Gotta M., Palladino P., Martin S.G., and Gasser S.M. 1998. Targeting Sir proteins to sites of action: A general mechanism for regulated repression. Cold Spring Harbor Symp. Quant. Biol. 63: 401-412

CuthbertG.L., Daujat S., Snowden A. W.. Erdjument-Bromage H., Hagiwara T, Yamada M., Schneider R., Gregory P.D., Tempst P., Bannister A.J., and Kouzarides T. 2004. Histone deimination antagonizes arginine methylation. Cell 118: 545–553.

Dion M.F., Altschuler S.J., Wu L.F., and Rando O.J. 2005. Genomic characterization reveals a simple histone H4 acetylation code. Proc. Natl. Acad. Sci. 102: 5308–5309.

Doerfler W., Kruczek I., Eick D., Vardimon L, and Kron B. 1983. DNA methylation and gene activity: The adenovirus system as a model. Cold Spring Harbor Symp. Quant. Biol. 47: 593–603.

Feinberg A.P., Kalikin L.M., Johnson L.A., and Thompson J.S. 1994. Loss of imprinting in human cancer. Cold Spring Harbor Symp. Quant. Biol. 59: 357–364.

Fox C.A., Loo S., Rivier D.H., Foss M.A., and Rine J. 1993. A transcriptional silencer as a specialized origin of replication that establishes functional domains of chromatin. Cold Spring Harbor Symp. Quant. Biol. 58: 443–455.

Frankel J 1990. Positional order and cellular handedness. J. Cell Sci. 97: 205–211.

Gartler S.M., and Linder D. 1964. Selection In mammalian mosaic cell populations. Cold Spring Harbor Symp. Quant. Biol. 29: 253–260.

Gasser S.M., Hediger R., Taddei A., Neumann F.R., and Gartenberg M.R. 2004. The function of telomere clustering in yeast: The circe effect. Cold Spring Harbor Symp. Quant. Biol. 69: 327–337.

Georges M., Charlier C, Smit M., Davis E., Shay T., Tordoir X., Takeda H., Caiment R, and Cockett N. 2004. Toward molecular understanding of polar overdominance at the ovine callipyge locus. Cold Spring Harbor Symp. Quant. Biol. 69: 477–483.

Goldschmidt R.B. 1951. The theory of the gene: Chromosomes and genes. Cold Spring Harbor Symp. Quant. Biol. 16: 1-11.

Haber J.E., Weiffenbach B., Rogers D.T., McCusker J., and Rowe L.B. 1981. Chromosomal rearrangements accompanying yeast mating-type switching: Evidence for a gene-conversion model. Cold Spring Harbor Symp. Quant. Biol. 45: 991-1002.

Haig D. 2004. The (dual) origin of epigenetics. Cold Spring Harbor Symp. Quant. Biol. 69: 67.

HenikoffS. 1990. Position-effect variegation after 60 years. Trends Genet. 6: 422–426.

HenikoffS., McKittrick E., and Ahmad K. 2004. Epigenetics, histone H3 variants, and the inheritance of chromatin states. Cold Spring Harbor Symp. Quant. Biol. 69: 235–243.

Hemday A.D.. Braaten B.A., and Low D.A. 2003. The mechanism by which DNA adenine methylase and PapI activate the pap epigenetic switch. Mol. Cell 12: 947–957.

Hodgkin J., Doniach T., and Shen M. 1985. The sex determination pathway in the nematode Caenorhabditis elegans: Variations on a theme. Cold Spring Harbor Symp. Quant. Biol. 50: 585–593.

Imai S., Johnson F.B., Marciniak R.A., McVey M., Park P.U., and Guarente L. 2000. Sir2: An NAD-dependent histone deacetylase that connects chromatin silencing, metabolism, and aging. Cold Spring Harbor Symp. Quant. Biol. 65: 297–302.

Jenuwein T. and Allis CD. 2001. Translating the histone code. Science 293: 1074–1080.

Klar A.J., and Bonaduce M.J. 1993. The mechanism of fission yeast mating-type interconversion: Evidence for two types of epigenet-ically inherited chromosomal imprinted events. Cold Spring Harbor Symp. Quant. Biol. 58: 457–465.

Klar A.J., Hicks J.B., and Strathem J.N. 1981. Irregular transpositions of mating-type genes in yeast. Cold Spring Harbor Symp. Quant. Biol. 45: 983–990.

Kubicek S. and Jenuwein T. 2004. A crack in histone lysine methylation. Cell 119: 903–906.

La Volpe A., Taggart ML, Macleod D., and Bird A. 1983. Coupled demethylation of sites in a conserved sequence of Xenopus ribosomal DNA. Cold Spring Harbor Symp. Quant. Biol. 47: 585–592.

Laroche X., Martin S.G., Gotta M., Gorham H.C., Pryde F.E., Louis E.J., and Gasser S.M. 1998. Mutation of yeast Ku genes disrupts the subnuclear organization of telomeres. Curr. Biol. 8: 653–656.

Laurenson P. and Rine J. 1992. Silencers, silencing, and heritable transcriptional states. Microbiol. Rev. 56: 543–560.

Lewis E.B. 1985. Regulation of the genes of the bithorax complex in Drosophila. Cold Spring Harbor Symp. Quant. Biol. 50: 155–164.

Li E., Beard C, Forster A.C., BestorT.H., and Jaenisch R. 1993. DNA methylation, genomic imprinting, and mammalian development. Cold Spring Harbor Symp. Quant. Biol. 58: 297–305.

Locke J., Kotarski M.A., and Tartof K.D. 1988. Dosage-dependent modifiers of position effect variegation in Drosophila and a mass action model that explains their effect. Genetics 120: 181–198.

Lolle S.J., Victor J.L., Young J.M., and Pruitt R.E. 2005. Genome-wide non-mendelian inheritance of extra-genomic information in Arabidopsis. Nature 434: 505–509.

Losick R. 1998. Summary: Three decades after sigma. Cold Spring Harbor Symp. Quant. Biol. 63: 653–666.

Louie A.J., Candido E.P., and Dixon G.H. 1974. Enzymatic modifications and their possible roles in regulating the binding of basic proteins to DNA and in controlling chromosomal structure. Cold Spring Harbor Symp. Quant. Biol. 38: 803–819.

Lyon M.R. 1961. Gene action in the X-chromosome of the mouse (Mus musculus L.). Nature 190: 372–373.

Lyon M.R. 1961. Epigenetic inheritance in mammals. Trends Genet. 9: 123–128.

Maine E.M., Salz H.K., Schedl P., and Cline T.W. 1985. Sex-lethal, a link between sex determination and sexual differentiation in Drosophila melanogaster. Cold Spring Harbor Symp. Quant. Biol. 50: 595–604.

Martin-Morris L.E., Loughney K., Kershisnik E.O., Poortinga G., and HenikoffS. 1993. Characterization of sequences responsible for trans-inactivation of the Drosophila brown gene. Cold Spring Harbor Symp. Quant. Biol. 58: 577–584.

McClintock B. 1951. Chromosome organization and genic expression. Cold Spring Harbor Symp. Quant. Biol. 16: 13–47.

McClintock B. 1956. Controlling elements and the gene Cold Spring Harbor Symp. Quant. Biol. 21: 197–216.

Megee P.C., Morgan B.A., and Smith M.M. 1995. Histone H4 and the maintenance of genome integrity. Genes Dev. 9: 1716–1727.

Millar C.B., Kurdistani S.K., and Grunstein M. 2004. Acetylation of yeast histone H4 lysine 16: A switch for protein interactions in heterochromatin and euchromatin. Cold Spring Harbor Symp. Quant. Biol. 69: 193–200.

Mirkovitch J., Gasser S.M., and Laemmli U.K. 1987. Relation of chromosome structure and gene expression. Philos. Trans. R. Soc. Lond. B Biol. Sci. 317: 563–574.

Mostoslavsky R., Kirillov A., Ji Y.H., Goldmit M., Holzmann M., Wirth T., Cedar H., and Bergman Y. 1999. Demethylation and the establishment of k allelic exclusion Cold Spring Harbor Symp. Quant. Biol. 64: 197–206.

Muller H.J. 1941. Induced mutations in Drosophila. Cold Spring Harbor Symp. Quant. Biol. 9: 151–167.

Nance W.E. 1964. Genetic tests with a sex-linked marker: Glucose 6-phosphate dehydrogenase. Cold Spring Harbor Symp. Quant. Biol. 29: 415–425.

Nanney D.L. 1958. Epigenetic factors affecting mating type expression in certain ciliates. Cold Spring Harbor Symp. Quant. Biol. 23: 327–335.

Nasmyth K.A., Tatchell K., Hall B.D., Astell C., and Smith M. 1981. Physical analysis of mating-type loci in Saccharomyces cerevisiae. Cold Spring Harbor Symp. Quant. Biol. 45: 961–981.

Palladino E., Laroche T., Gilson E., Pillus L., and Gasser S.M. 1993. The positioning of yeast telomeres depends on SIR3, SIR4, and the integrity of the nuclear membrane. Cold Spring Harbor Symp. Quant. Biol. 58: 733–746.

Pannetier C., Hu-Li J., and Paul W.E. 1999. Bias in the expression of IL-4 alleles: The use of T cells from a GFP knock-in mouse. Cold Spring Harbor Symp. Quant. Biol. 64: 599–602.

Peacock W.J., Brutlag D., Goldring E., Appels R., Hinton C.W., and Lindsley D.L. 1974. The organization of highly repeated DNA sequences in Drosophila melanogaster chromosomes. Cold Spring Harbor Symp. Quant. Biol. 38: 405–416.

Pillus L. and Rine J. 1989. Epigenetic inheritance of transcriptional states in S. cerevisiae. Cell 59: 637–647.

Ptashne M. 2004. A genetic switch: Phage lambda revisited, 3rd edition. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York.

Renauld H., Aparicio O.M., Zierath P.D., Billington B.L., Chhablani S.K., and Gottschling D.E. 1993. Silent domains are assembled continuously from the telomere and are defined by promoter distance and strength, and by SIR3 dosage. Genes Dev. 7: 1133–1145.

Rine J., Jensen R., Hagen D., Blair L., and Herskowitz I. 1981. Pattern of switching and fate of the replaced cassette in yeast mating-type interconversion. Cold Spring Harbor Symp. Quant. Biol. 45: 951–960.

Rubin G.M. 1985. Summary. Cold Spring Harbor Symp. Quant. Biol. 50: 905–908.

Rubin G.M., HazelriggT., Karess R.E., Laski F.A., Laverty T., Levis R., Rio D.C., Spencer F.A., and Zuker C.S. 1985. Germ line specificity of P-element transposition and some novel patterns of expression of transduced copies of the white gene. Cold Spring Harbor Symp. Quant. Biol. 50: 329–335.

Rudkin G.T. and Tartof K.D. 1974. Repetitive DNA in polytene chromosomes of Drosophila melanogaster Cold Spring Harbor Symp. Quant. Biol. 38: 397–403.

Schubeler D., MacAlpine D.M., Scalzo D., Wirbelauer C., Kooper-berg C, van Leeuwen R, Gottschling D.E., O’Neill L.P., Turner B.M., Delrow J., et al. 2004. The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote. Genes Dev. 18: 1263–1271.

Schultz J. 1956. The relation of the heterochromatic chromosome regions to the nucleic acids of the cell. Cold Spring Harbor Symp. Quant. Biol. 21: 307-328

Selker E.U., Richardson G.A., Garrett-Engele P.W., Singer M.J., and Miao V. 1993. Dissection of the signal for DNA methylation in the ζ-η) region of Neurospora. Cold Spring Harbor Symp. Quant. Biol. 58: 323–329.

Shapiro L.J. and Mohandas T. 1983. DNA methylation and the control of gene expression on the human X chromosome Cold Spring Harbor Symp. Quant. Biol. 47: 631–637.

Shi Y., Lan E., Matson C., Mulligan P., Whetstine J.R., Cole P.A., and Casero R.A. 2004. Histone demethylation mediated by the nuclear amine oxidase homolog LSD1. Cell 119: 941–953.

Si K., Lindquist S., and Kandel E. 2004. A possible epigenetic mechanism for the persistence of memory. Cold Spring Harbor Symp. Quant. Biol. 69: 497–498.

Solter D., Aronson J., Gilbert S.F, and McGrath J. 1985. Nuclear transfer in mouse embryos: Activation of the embryonic genome. Cold Spring Harbor Symp. Quant. Biol. 50: 45–50.

Swift H. 1974. The organization of genetic material in eukaryotes: Progress and prospects. Cold Spring Harbor Symp. Quant. Biol. 38: 963–979.

Thompson J.S., Hecht A., and Grunstein M. 1993. Histones and the regulation of heterochromatin in yeast. Cold Spring Harbor Symp. Quant. Biol. 58: 247–256.

Tilghman S.M., Bartolomei M.S., Webber A.L., Brunkow M.E., Saam J., Leighton P.A., Pfeifer K., and Zemel S. 1993. Parental imprinting of the H19 and Igf2 genes in the mouse. Cold Spring Harbor Symp. Quant. Biol. 58: 287–295.

Vazquez J., Farkas G., Gaszner M., Udvardy A., Muller M., Hag-strom K., Gyurkovics H., Sipos L., Gausz J., Galloni M., et al. 1993. Genetic and molecular analysis of chromatin domains. Cold Spring Harbor Symp. Quant. Biol. 58: 45–54.

Wade P.A., Jones P.L., Vermaak D., Veenstra G.J., Imhof A., Sera T., Tse C., Ge H., Shi Y.B., Hansen J.C., and Wolffe A.P. 1998. Histone deacetylase directs the dominant silencing of transcription in chromatin: Association with MeCP2 and the Mi-2 chromodomain SWI/SNF ATPase. Cold Spring Harbor Symp. Quant Biol. 63: 435–445.

Wang Y., Wysocka J., Perlin J.R., Leonelli L., Allis C.D., and Coonrod S.A. 2004. Linking covalent histone modifications to epigenetics: The rigidity and plasticity of the marks. Cold Spring Harbor Symp. Quant. Biol. 69: 161–169.

Weintraub H. 1974. The assembly of newly replicated DNA into chromatin. Cold Spring Harbor Symp. Quant. Biol. 38: 247–256.

Weintraub H. 1993. Summary: Genetic tinkering local problems, local solutions. Cold Spring Harbor Symp. Quant. Biol. 58: 819–836.

Weintraub H., Flint S.J., Leffak I.M., Groudine M., and Grainger R.M. 1978. The generation and propagation of variegated chromosome structures. Cold Spring Harbor Symp. Quant. Biol. 42: 401–407.

Wickner R.B., Edskes H.K., Rosj> E.D., Pierce M.M., Baxa U., Brachmann A., and Shewmaker F. 2004a. Prion genetics: New rules for a new kind of gene. Annu. Rev. Genet. 38: 681–707.

Wickner R.B., Edskes H.K., Ross E.D., Pierce M.M., Shewmaker P., Baxa U., and Brachmann A. 2004b. Prions of yeast are genes made of protein: Amyloids and enzymes Cold Spring Harbor Symp. Quant. Biol. 69: 489–496.

Willard H.F., Brown C.J., Carrel L., Hendrich B., and Miller A. P. 1993. Epigenetic and chromosomal control of gene expression: Molecular and genetic analysis of X chromosome inactivation. Cold Spring Harbor Symp. Quant. Biol. 58: 315–322.

Wood W.B., Meneely P., Schedin P., and Donahue L. 1985. Aspects of dosage compensation and sex determination in Caenorhabditis elegans. Cold Spring Harbor Symp. Quant. Biol. 50: 575–583. Yarmolinsky M.B. 1981. Summary. Cold Spring Harbor Symp. Quant. Biol. 45: 1009–1015.

Zheng C., and Hayes J.J. 2003. Structures and interactions of the core histone tail domains. Biopolymers 68: 539–546.